MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
19428wH3_P2318
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 233
bases: 5,137,552 bps
CDS: 4,335
rRNA: 8
tRNA: 72
tmRNA: 1
Total number of protein coding genes annotated/found:
4,123
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5013|JADGKQ010000001.1
MBF0727999.1
Genome Viewer
NA
AA
822/274
161-982
WYL domain-containing protein
SEQF5013|JADGKQ010000001.1
MBF0728000.1
Genome Viewer
NA
AA
558/186
1377-1934
PD-(D/E)XK nuclease family protein
SEQF5013|JADGKQ010000001.1
MBF0728001.1
Genome Viewer
NA
AA
2247/749
1976-4222
leucine-rich repeat protein
SEQF5013|JADGKQ010000001.1
MBF0728002.1
Genome Viewer
NA
AA
408/136
4260-4667
hypothetical protein
SEQF5013|JADGKQ010000001.1
MBF0728003.1
Genome Viewer
NA
AA
855/285
5687-4833
PD-(D/E)XK nuclease family transposase
SEQF5013|JADGKQ010000001.1
MBF0728004.1
Genome Viewer
NA
AA
789/263
6123-6911
nucleoside triphosphate pyrophosphohydrolase
SEQF5013|JADGKQ010000001.1
MBF0728005.1
Genome Viewer
NA
AA
681/227
6938-7618
PorT family protein
SEQF5013|JADGKQ010000001.1
MBF0728006.1
Genome Viewer
NA
AA
468/156
8159-7692
hypothetical protein
SEQF5013|JADGKQ010000001.1
MBF0728007.1
Genome Viewer
NA
AA
378/126
8564-8187
hypothetical protein
SEQF5013|JADGKQ010000001.1
MBF0728008.1
Genome Viewer
NA
AA
552/184
9163-8612
sigma-70 family RNA polymerase sigma factor
SEQF5013|JADGKQ010000001.1
MBF0728009.1
Genome Viewer
NA
AA
1560/520
10748-9189
L%2CD-transpeptidase family protein
SEQF5013|JADGKQ010000001.1
MBF0728010.1
Genome Viewer
NA
AA
939/313
11661-10723
ribonuclease Z
SEQF5013|JADGKQ010000001.1
MBF0728011.1
Genome Viewer
NA
AA
1800/600
13784-11985
30S ribosomal protein S1
SEQF5013|JADGKQ010000001.1
MBF0728012.1
Genome Viewer
NA
AA
564/188
14054-14617
sigma-70 family RNA polymerase sigma factor
SEQF5013|JADGKQ010000001.1
MBF0728013.1
Genome Viewer
NA
AA
1137/379
14895-16031
FecR family protein
SEQF5013|JADGKQ010000001.1
MBF0728014.1
Genome Viewer
NA
AA
3594/1198
16039-19632
SusC/RagA family TonB-linked outer membrane protein
SEQF5013|JADGKQ010000001.1
MBF0728015.1
Genome Viewer
NA
AA
1584/528
19645-21228
RagB/SusD family nutrient uptake outer membrane protein
SEQF5013|JADGKQ010000001.1
MBF0728016.1
Genome Viewer
NA
AA
1029/343
21264-22292
hypothetical protein
SEQF5013|JADGKQ010000001.1
MBF0728017.1
Genome Viewer
NA
AA
1062/354
22316-23377
fibrobacter succinogenes major paralogous domain-containing protein
SEQF5013|JADGKQ010000001.1
MBF0728018.1
Genome Viewer
NA
AA
1476/492
23398-24873
thioredoxin family protein
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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